Pairwise Alignments

Query, 594 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

Subject, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

 Score =  100 bits (250), Expect = 8e-26
 Identities = 92/391 (23%), Positives = 171/391 (43%), Gaps = 49/391 (12%)

Query: 215 LGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDYLG 274
           +GP HP      RI L ++GE +     D+GY HRG E++ E + +   I  ++R+  + 
Sbjct: 6   IGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKHYLKCIHLSERVCGIC 65

Query: 275 GVMNNLPYVLSVEKLAGIKVPDRVDTIRIMMAEFFRITSHLLFLGTYIQDVGAMTPVFFT 334
             ++   +   +E +  I+VP++   +R++  E  RI SHL+    Y   +   T   + 
Sbjct: 66  SYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETLGIWM 125

Query: 335 FTDRQRAYKVIEAITGFRLHPAWYRIGGVAHDLPNGWDRLVKEFIDWMPKRLDEYQKAAL 394
              R+    ++E ITG R++  +  +GGV  DL        KE +D + K++DE+++   
Sbjct: 126 LNVRESIMDLLELITGNRVNMGFNVVGGVRLDLN-------KEILDKIHKKIDEFEEDVK 178

Query: 395 D-------NSILKGRTIGVAQYNTKEALEWGVTGAGLRSTG---CDFDLRKARPYSGYEN 444
           +         ++  R+  + +   KE ++    G   R++G    D+ +R    +  Y+ 
Sbjct: 179 NIIEVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIR----HETYKA 234

Query: 445 FEFEVPLAANGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQ 504
             F+      GD Y R +VR +E+  S+++I + + +     Y     +     + R   
Sbjct: 235 LNFKPDWRNEGDNYARMMVRHDEVLTSVELIRRALEH-----YAESSGIVRNKAEIR--- 286

Query: 505 HIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFAHLQ 564
                              A E     EA +G   Y +    G +  R  IRTP+  +L+
Sbjct: 287 -------------------ATEGEWYNEAHRGEVYYKIAITDGGLIKRIIIRTPTVMNLE 327

Query: 565 QIPSVIKG-EMVADLIAYLGSIDFVMADVDR 594
               +IK    +AD +A   SID  ++  +R
Sbjct: 328 AYKYMIKDCPTIADAVATYTSIDPCVSCTER 358