Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

 Score = 75.9 bits (185), Expect = 4e-19
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 61  YNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQ 120
           Y  G + C +E+     +P   A      +  +PR+AD +V+ G     ++  ++++Y++
Sbjct: 17  YTGGCNGCDIEVVNCVLSPFYDAEQYNVFLTWNPREADVLVVTGCVTKAVSASLKKIYDE 76

Query: 121 MLEPKWVISMGSCANSGGMYDIYSVVQG--------VDKFLPVDVYVPGCPPRPEAFLQG 172
           + EPK V++ G+CA  GG+Y+      G        V+  +PVDV VPGCPPRPE  + G
Sbjct: 77  IPEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVDVKVPGCPPRPEDVITG 136

Query: 173 LM 174
           ++
Sbjct: 137 IV 138