Pairwise Alignments

Query, 224 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 224 a.a., NADH dehydrogenase I, B subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  388 bits (996), Expect = e-113
 Identities = 179/224 (79%), Positives = 204/224 (91%)

Query: 1   MQYNLTRIDPDAPNEQYPIGERETVSDPLEDQVHKNIYMGKLEDVLSGAVNWGRKNSLWP 60
           M+Y LTRIDPDAP E+YP  +R+TV DPL  +  + I MG+LE+VL   VNWGRKNSLWP
Sbjct: 1   MKYTLTRIDPDAPVERYPQEQRQTVDDPLAQEATRGIMMGRLEEVLKDTVNWGRKNSLWP 60

Query: 61  YNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGTCFIKMAPIIQRLYEQ 120
           YNFG+SCCYVEM TAFT+PHD+ARFGAEVIRASPRQADFMVIAGT FIKMAP+IQRLYEQ
Sbjct: 61  YNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQ 120

Query: 121 MLEPKWVISMGSCANSGGMYDIYSVVQGVDKFLPVDVYVPGCPPRPEAFLQGLMLLQESI 180
           +LEPKWVISMG+CANSGGMYDIYSVVQGVDKFLPVDVY+PGCPPRPEAFLQ LMLLQ+SI
Sbjct: 121 LLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQALMLLQDSI 180

Query: 181 GKERRPLSWVVGDQGVYRAEMPSQKEQRREQRIQVTNLRSPDEV 224
           GKERRPLSWVVGDQG+YR +MP++KE++R +RI VTNLR+PDE+
Sbjct: 181 GKERRPLSWVVGDQGIYRPQMPAEKERKRGERINVTNLRTPDEI 224