Pairwise Alignments

Query, 418 a.a., isocitrate dehydrogenase from Pseudomonas simiae WCS417

Subject, 475 a.a., isocitrate dehydrogenase from Synechococcus elongatus PCC 7942

 Score =  429 bits (1102), Expect = e-124
 Identities = 231/474 (48%), Positives = 308/474 (64%), Gaps = 62/474 (13%)

Query: 3   YKKIQVPAVGDKITVNADHSLNVPDQPIIPYIEGDGIGVDISPVMIKVVDAAVEKAYGGK 62
           Y+KIQ P+ G KI   A   + VPD PIIP+I GDG GVDI P   +V+DAAV KAYGG+
Sbjct: 2   YEKIQPPSEGSKIRFEAGKPI-VPDNPIIPFIRGDGTGVDIWPATERVLDAAVAKAYGGQ 60

Query: 63  RKISWMEVYAGEKATQVYDQDTWLPQETLDAVKDYVVSIKGPLTTPVGGGIRSLNVALRQ 122
           RKI+W +VYAG++A  +Y    +LP++TL A+++Y V+IKGPLTTP+GGGIRSLNVALRQ
Sbjct: 61  RKITWFKVYAGDEACDLYGTYQYLPEDTLTAIREYGVAIKGPLTTPIGGGIRSLNVALRQ 120

Query: 123 QLDLYVCLRPVRWFEGVPSPVKKPGDVDMTIFRENSEDIYAGIEWKAGSAEAIKVIKFLK 182
             DLY C+RP R++ G PSP + P  +D+ ++REN+EDIY GIEWK G     ++IK L 
Sbjct: 121 IFDLYACVRPCRYYTGTPSPHRTPEQLDVVVYRENTEDIYLGIEWKQGDPTGDRLIKLLN 180

Query: 183 EE-------MGVTKIRFDQDCGIGIKPVSLEGTKRLARKALQYV--VDNDRDSLTIVHKG 233
           E+       +G  +IR D   GIGIKP+S  G++RL R+A+++   ++  +  +T+VHKG
Sbjct: 181 EDFIPNSPSLGKKQIRLDS--GIGIKPISKTGSQRLIRRAIEHALRLEGRKRHVTLVHKG 238

Query: 234 NIMKFTEGAFKEWAYEVAAEEF--------------------------GATLLDGG---- 263
           NIMKFTEGAF++W YE+A  EF                           A L++ G    
Sbjct: 239 NIMKFTEGAFRDWGYELATTEFRTDCVTERESWILANQESKPDLSLEDNARLIEPGYDAM 298

Query: 264 -PWMQ-----------------FKNPKTGKNVVVKDAIADAMLQQILLRPAEYDVIATLN 305
            P  Q                   N +    V+V D IAD++ QQI  RP EY V+AT+N
Sbjct: 299 TPEKQAAVVAEVKAVLDSIGATHGNGQWKSKVLVDDRIADSIFQQIQTRPGEYSVLATMN 358

Query: 306 LNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDQVNPGSLILSAEMM 365
           LNGDY+SDA AA VGG+G+APGAN+ D  A+FEATHGTAPK+AG D++NPGS+ILS  MM
Sbjct: 359 LNGDYISDAAAAVVGGLGMAPGANIGDEAAIFEATHGTAPKHAGLDRINPGSVILSGVMM 418

Query: 366 LRHMGWTEAADLIIKGTNGAISAKTVTYDFERLMDGA--KLVSSSGFGDALISH 417
           L ++GW EAADLI KG + AI+ + VTYD  RLM+ A  + +  S F +A++ H
Sbjct: 419 LEYLGWQEAADLITKGISQAIANREVTYDLARLMEPAVDQPLKCSEFAEAIVKH 472