Pairwise Alignments

Query, 418 a.a., isocitrate dehydrogenase from Pseudomonas simiae WCS417

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  179 bits (453), Expect = 1e-49
 Identities = 120/360 (33%), Positives = 181/360 (50%), Gaps = 61/360 (16%)

Query: 31  IPYIEGDGIGVDISPVMIKVVDAAVEKAYGGKRKISWMEVYAGEKATQVYDQDTWLPQET 90
           I  I GDGIG  I    +K++D         K    +   +A      +  Q   LPQ T
Sbjct: 6   ITVIPGDGIGPSIIDSALKILD---------KAGCDFEYEFADAGLAALEKQGELLPQRT 56

Query: 91  LDAVKDYVVSIKGPLTTPVGGGIRSLNVALRQQLDLYVCLRPVRWFEGVPSPVKKPGDVD 150
           L+ ++   +++KGPLTTPVG G  S+NV LR++  LY  +RPV  F+G  +  +   ++D
Sbjct: 57  LELIEKNRITLKGPLTTPVGEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYE---NID 113

Query: 151 MTIFRENSEDIYAG----IEWKAGSAEAIKVIKFLKEEMGVTKIRFDQDCGIGIKPVSLE 206
           +   REN+E +Y+G    +     +AEA  +                         V+ +
Sbjct: 114 IITVRENTEGMYSGHGQKVSEDGSTAEATSI-------------------------VTRQ 148

Query: 207 GTKRLARKALQYVVDNDRDSLTIVHKGNIMKFTEGAFKEWAYEVAAEEFGATLLDGGPWM 266
           G +++A  A +      R  +TIVHK NIMK T G F + A EV+              +
Sbjct: 149 GAEQIATFAYELARKESRKKVTIVHKANIMKSTSGLFLKVAREVS--------------L 194

Query: 267 QFKNPKTGKNVVVKDAIADAMLQQILLRPAEYDVIATLNLNGDYLSDALAAEVGGIGIAP 326
           ++ + KT      ++ I DA   ++++ P  +DVI T NL GD LSD  A  VGG+G+AP
Sbjct: 195 RYPDIKT------EEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCAGLVGGLGMAP 248

Query: 327 GANLSDTVAMFEATHGTAPKYAGKDQVNPGSLILSAEMMLRHMGWTEAADLIIKGTNGAI 386
           GAN+    A+FEA HG+AP  AGK+  NP S+IL++  ML ++G  + A  I K  +  I
Sbjct: 249 GANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKAAPIRKAVSAVI 308