Pairwise Alignments

Query, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

Subject, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 17  LRSTNLDEYVGQEHLLARGKPLREA--LEQGALHSMIFWGPPGVGKTTLARLLAKVSDAH 74
           +R   L +Y GQ+H+  + +   +A  + Q AL  ++ +GPPG+GKTTLA ++A     +
Sbjct: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84

Query: 75  FETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQQDAFLPYVEDGTL- 133
             T S  +     + +A ++A        +  +LF+DE+HR +   ++   P +ED  L 
Sbjct: 85  IRTTSGPV-----LEKAGDLAALLT-NLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138

Query: 134 IFIG 137
           I IG
Sbjct: 139 IMIG 142