Pairwise Alignments

Query, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

Subject, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 42/251 (16%)

Query: 13  LAARLRSTNLDEYVGQEHLLARGKPLREALEQGALH-SMIFWGPPGVGKTTLARLLAK-- 69
           LA + R T   E VGQ H+L     L  AL Q  LH + +F G  GVGKTT+ RL AK  
Sbjct: 6   LARKWRPTRFSEVVGQSHVLTA---LENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGL 62

Query: 70  -------------------VSDAHF----ETVSAVLAGVKEIRQAVEVAKQQAGQYGKRT 106
                              +    F    E  +A    V++ R+ ++  + +  + G+  
Sbjct: 63  NCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPAR-GRFK 121

Query: 107 ILFVDEVHRFNKSQQDAFLPYVEDGT--LIFIGATTENPSFELNNALLSRARVYVLKSLD 164
           +  +DEVH  ++   +A L  +E+    + F+ ATT+    +L   +LSR   + LK + 
Sbjct: 122 VYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ--KLPVTILSRCLQFHLKPIS 179

Query: 165 EAAMQKLLQRALSEDKGLGKRQLRVSEEGFKILLTAADGDGRRFLNLVENASDLAEDGSE 224
              +Q+ L      DK L   Q+    +   +L  AADG  R  L+L + A  +A     
Sbjct: 180 VENIQQQL------DKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQA--IALGNGV 231

Query: 225 IGVDLLQSLLG 235
           +  D++  +LG
Sbjct: 232 VKSDIVAHMLG 242