Pairwise Alignments

Query, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Shewanella amazonensis SB2B

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 15/151 (9%)

Query: 2   DLFRSDPIAQPLAARLRSTNLDEYVGQEHLLARGKPLREALEQG--ALHSMIFWGPPGVG 59
           DL + D I + +  +L    LDEY GQ+   A+ K   EA ++   AL  M+ +GPPG+G
Sbjct: 12  DLGQEDVIDRAMRPKL----LDEYTGQDDTRAQLKVFIEAAKKRGEALDHMLIYGPPGLG 67

Query: 60  KTTLARLLAKVSDAHFETVSA-VLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNK 118
           KTTLA ++A     + ++ S  VL    ++  A  +   + G      +LF+DE+HR + 
Sbjct: 68  KTTLANIVANEMGVNIKSTSGPVLEKAGDL--AALLTNLEEGD-----VLFIDEIHRLSP 120

Query: 119 SQQDAFLPYVEDGTL-IFIGATTENPSFELN 148
             ++   P +ED  L I IG      S +L+
Sbjct: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLD 151