Pairwise Alignments

Query, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

Subject, 642 a.a., DNA polymerase III subunit tau from Enterobacter sp. TBS_079

 Score = 72.0 bits (175), Expect = 5e-17
 Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 44/254 (17%)

Query: 11  QPLAARLRSTNLDEYVGQEHLLARGKPLREALEQGALH-SMIFWGPPGVGKTTLARLLAK 69
           Q LA + R     + VGQEH+L     L   L  G +H + +F G  GVGKT++ARLLAK
Sbjct: 4   QVLARKWRPQTFADVVGQEHVLTA---LANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60

Query: 70  VSDAHFET-VSAVLAGV----KEIRQA-------VEVAK--------------QQAGQYG 103
               + ET ++A   GV    +EI Q        ++ A               Q A   G
Sbjct: 61  --GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARG 118

Query: 104 KRTILFVDEVHRFNKSQQDAFLPYVED--GTLIFIGATTENPSFELNNALLSRARVYVLK 161
           +  +  +DEVH  ++   +A L  +E+    + F+ ATT+    +L   +LSR   + LK
Sbjct: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQ--KLPVTILSRCLQFHLK 176

Query: 162 SLDEAAMQKLLQRALSEDKGLGKRQLRVSEEGFKILLTAADGDGRRFLNLVENASDLAED 221
           +LD   ++  L+  L E+K      +       ++L  AADG  R  L+L + A  +A  
Sbjct: 177 ALDVEQIRAQLEHILDEEK------IVHESRALQLLARAADGSLRDALSLTDQA--IASG 228

Query: 222 GSEIGVDLLQSLLG 235
             ++  D + ++LG
Sbjct: 229 DGKLSTDAVSTMLG 242



 Score = 25.0 bits (53), Expect = 0.007
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 314 QERLGSPEGELAVAQAITYLACAPKSNAVYMGFKSALRAAAEY 356
           Q  L SP  + A+A+A+T L  AP    +      A+R   E+
Sbjct: 559 QRHLNSPGAQKALAEALTALHGAPVELTIIEDDNPAVRTPLEW 601