Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas simiae WCS417

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  295 bits (756), Expect = 2e-84
 Identities = 164/381 (43%), Positives = 237/381 (62%), Gaps = 14/381 (3%)

Query: 7   VWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASGLDL 66
           + IV+D+  IR  L + L++         S      R +    D+I+SD+R+PGA G +L
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63

Query: 67  LARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVALVKRANQHAQEQ 126
           + ++ E     PV+IMT+++ L SAV S + GA +Y+ KPFD DE +  V R     Q+ 
Sbjct: 64  I-KLAEG---TPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119

Query: 127 QNQEAPPALTRTPE----------IIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKE 176
              +A PA + +            IIG    MQ++F  I +++ ++  VLI GESGTGKE
Sbjct: 120 AAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESGTGKE 179

Query: 177 LVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGT 236
           LVA ALH  S RA +P I++N AAIP+ L+ESELFGHEKGAFTGA+  R G  E ADGGT
Sbjct: 180 LVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGT 239

Query: 237 LFLDEIGDMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFRE 296
           LFLDEIG++P + Q RLLRVL +GE  RVG     KVDVR+IAATH++L+TL   G+FRE
Sbjct: 240 LFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTGQFRE 299

Query: 297 DLFHRLNVIRIHIPRMSDRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPG 356
           DL++RL+VI + +P + +R  D+  +A+ FL+R  + +  +      + E+ +++  WPG
Sbjct: 300 DLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSRDAEQAIRHYSWPG 359

Query: 357 NVRQLENTCRWITVMASGREV 377
           NVR+LEN      +++   E+
Sbjct: 360 NVRELENAIERAAILSESPEI 380