Pairwise Alignments

Query, 393 a.a., carnitine dehydratase from Pseudomonas simiae WCS417

Subject, 407 a.a., Predicted acyl-CoA transferases/carnitine dehydratase from Pseudomonas stutzeri RCH2

 Score =  214 bits (544), Expect = 5e-60
 Identities = 148/410 (36%), Positives = 220/410 (53%), Gaps = 21/410 (5%)

Query: 1   MSGPLASLKVLDFSTLLPGPFASLMLADMGAEVLRIESPTRMDLLRVLPP------HDQG 54
           M G L+ ++VLD S +L GP+   +L D+GAEV+++E P   D  R   P      H + 
Sbjct: 1   MPGALSHIRVLDLSRVLAGPWCGQILGDLGAEVIKVERPGTGDDTRHWGPPYLKDQHGEN 60

Query: 55  TSASHAYL--NRNKRSLALDLKQAEALEIVRVLVNDYDILLEQFRPGVMDRLGLGYEALK 112
           TS +  YL  NRNK+SL +D  + E   I+R LV   D+LLE F+ G +   GL YE+LK
Sbjct: 61  TSEAAYYLTANRNKQSLTVDFTRPEGQRIIRELVAQCDVLLENFKVGGLAAYGLDYESLK 120

Query: 113 AINPRLIYVAITGYGQTGPYKDRAGHDINYLALAGVASYTGRQD----AGPLPLGVQLAD 168
           A+NPRLIY +ITG+GQ GPY  RAG+D     L G+ S TGR D    AGP+ +GV L D
Sbjct: 121 ALNPRLIYCSITGFGQDGPYATRAGYDFMIQGLGGLMSLTGRSDAEEGAGPVKVGVALTD 180

Query: 169 VGGGSLHAVVGLLAAVIARQQSGVGQYLDVSMTDCSFSLNAMAGAGYLACGVEPEWESHV 228
           +  G L+A VG+LAA+  R++SG GQ++D ++ D   +        YLA GV P+   + 
Sbjct: 181 ILTG-LYATVGVLAALAHRERSGEGQHIDTALLDVQVACLGNQALNYLATGVAPKRMGNA 239

Query: 229 LNGGSFYDYYRSRDGRWMSVGSLEPAFMQQLCTALGRPELA-----AQGLSPKPEQQKAL 283
                 Y  + + DG  +     +  F ++ C   GRPE A     A   +    + + +
Sbjct: 240 HPNIVPYQDFPTADGDIILTVGNDGQF-RKFCEVAGRPEWATDPRFATNRARVAHRAELI 298

Query: 284 KQALQVEFEKRSFDELCALFAATDACVEPVLTLSEAVAHPQLKARALVSQVPRGDGSTQS 343
               QV   + + + + AL  A   C  P+  L++  A PQ++ R L  ++P        
Sbjct: 299 PLIRQVTVFRTTAEWVSALEQAGVPC-GPINDLAQVFADPQVQHRGLNVEMPHPLAGRVP 357

Query: 344 QLACPLKFSDGLPAPRHIGVAVGAHSDEVLVE-LGLSAQRIAELRQAKVV 392
           Q+A PL+ S    A R+    +G HS+ +L   LG++ ++IA LR A V+
Sbjct: 358 QVASPLRLSASPVAYRNPPPLLGEHSEALLQRLLGMNDEQIAGLRAAGVI 407