Pairwise Alignments

Query, 329 a.a., 2-hydroxyacid dehydrogenase from Pseudomonas simiae WCS417

Subject, 318 a.a., glycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (346), Expect = 3e-37
 Identities = 98/281 (34%), Positives = 144/281 (51%), Gaps = 29/281 (10%)

Query: 56  LSAPVLEHLAKGGTRLIALRSAGYNHVDLACAKRLGLTIVRVPAYSPHAVAEHAVALIL- 114
           L A  L  L K   + + + + G N VD+A AK LG+ +  VPAY   AVA+   A IL 
Sbjct: 55  LDAKTLAQLPK--LKYVGVLATGTNVVDIAAAKDLGIVVTNVPAYGHDAVAQMVFAHILH 112

Query: 115 -----ALNRRLHRAYNRTRDGDFSLHGLTGFDLVGKTVGVVGTGQIGATFAKIMAGFGCQ 169
                A + +   A   T   DF    +    L GKT+G++G G IG   AK+   FG +
Sbjct: 113 HTQAVAAHHQAVAAGQWTSCSDFCFTLMPLQSLKGKTLGLIGYGDIGQQVAKLALAFGMK 172

Query: 170 LLAY---DPFPNPQVQALGTRYVSLPELLAQAQIISLHCPLTADSKHLINARSLAQMQPG 226
           +L     +P   PQ    G  + S  ++L ++ I+SLHCPLT ++  LINA++L  M+P 
Sbjct: 173 VLVNTRTEPAHLPQ----GVSWTSRDKVLKESDILSLHCPLTPETNELINAQTLELMKPQ 228

Query: 227 AMLINTGRGGLVDTPALIEALKDGQLGYLGLDVYEEEAQLFFEDRSDLPLQDDVLARLLT 286
           A+LINT RGGL+D  AL  AL  G++ + G+DV   E           P  D+    LL+
Sbjct: 229 ALLINTARGGLIDEAALAVALTQGRV-FAGVDVLSTEP----------PSMDN---PLLS 274

Query: 287 FPNVIITAHQAFLTREALAAIAGTTLANIAAWADGRAQNLV 327
            PN+  + H A+ T+EA   +      N+ ++  G  +N V
Sbjct: 275 APNISTSPHNAWATKEARQNLLNIATENLKSFLQGNIRNCV 315