Pairwise Alignments

Query, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  270 bits (691), Expect = 2e-76
 Identities = 168/518 (32%), Positives = 287/518 (55%), Gaps = 17/518 (3%)

Query: 283 RIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSADNLLGIINEILD 342
           + K++FL+ +SHE+RTP+NG+LG + LL  + L+ +Q DY+ TI  S + LL +INEILD
Sbjct: 424 KTKADFLSKISHELRTPMNGVLGMSELLLGTSLSAKQRDYVQTIHSSGNELLNLINEILD 483

Query: 343 FSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALVGDPLRLK 402
            SK+E+G++ LD + F+   L++D L+I    A  +++EL+S +    P  + GDP RL+
Sbjct: 484 ISKLESGQIELDDVQFDFNALIEDCLSIFRAKAEQQKVELISFIQPQLPQVVAGDPTRLR 543

Query: 403 QILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISVQDTGIGLSSQDVRALFQAFSQ 462
           Q L NL+ NA K T EG ++  A + D  +D+ +LRI+VQD+G  L   +  AL  A   
Sbjct: 544 QTLLNLLENAFKQTDEGEVLLIAAV-DGPQDNPRLRITVQDSGRPLEPYERDALLNAAVD 602

Query: 463 ADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISLNLPK--TRDDVEDL 520
           + + L+    G  LGL+I+++L++ M G+ G+ +   +G+  WISL L       +  DL
Sbjct: 603 SHDFLASTRHGGRLGLIIARQLVQLMDGDFGIQTGTTQGNTLWISLPLASEGLAQNNADL 662

Query: 521 PSAPLLGHRVAVLENHELARQALQHQLEDCGLEVTPFNS-LESLTNGITSAHQTEQAIDL 579
              PL G R+ ++++++  R+ L  Q    GLEV+   S  E+L    T AH  E   D+
Sbjct: 663 -DGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEVSAVASGKEALALLRTKAHLREY-FDV 720

Query: 580 AVLGVTANDIPPERLNQHLWDLEHLGCKVLVLCPTTEQMLFNQSVPNPN--SQLQAKPAC 637
            +L      +   +L   + +   L   +L++  T      ++ +       ++ AKP  
Sbjct: 721 VLLDQDMPGMTGMQLASKIKEDSSLNHDILLIMLTGMGSAPSKIIARNAGIKRILAKPVA 780

Query: 638 TRKLRRALSDLISPRPSRSEPGEPLSS--RAP-------RVLCVDDNPANLLLVQTLLED 688
              L+  L+D ++ R   S+    L+S   AP       R+L  +DN  +  +++ +L  
Sbjct: 781 GYTLKTTLADELAQRLQSSQLRPALASPPLAPLEVPSDFRILVAEDNNISTKVIRGMLNK 840

Query: 689 MGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDGRQSTEAIRQWESERSGTPLPVVA 748
           +  +     +G  A++A+K   +DLVLMD +MP +DG Q+T+ +R+WE+    +  PVVA
Sbjct: 841 LNLQPDTACNGEEALEAIKTQPYDLVLMDCEMPVLDGFQATQQLREWEARNGRSRTPVVA 900

Query: 749 LTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKW 786
           LTAH ++  +    ++GMD ++ KP+    L +++  W
Sbjct: 901 LTAHILSEHRERAREAGMDGHMAKPVELSHLRELIDHW 938