Pairwise Alignments

Query, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  306 bits (783), Expect = 7e-87
 Identities = 236/680 (34%), Positives = 350/680 (51%), Gaps = 44/680 (6%)

Query: 261  LETIEIQNIELDLAR-KEALEA-SRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPR 318
            L+  E + +E +L + KEA +A S+ K +FLANMSHEIRTP+N ILG  HL   + L   
Sbjct: 581  LDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTT 640

Query: 319  QLDYLGTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAK 378
            Q  Y+  I +SA NLLGIIN+ILDFSK+EAGKL ++ I FNL D+L +   +++  A  K
Sbjct: 641  QRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEK 700

Query: 379  QLELVSLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLR 438
             +E +  +    PL L+GDPLRL Q++ NL  NA+KFT +G IV  A +    E  V LR
Sbjct: 701  GIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLR 760

Query: 439  ISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTP 498
             +V+DTGIG++   +  LF AFSQADNS++RQ GGTGLGL ISK+L+E MGG+I V S  
Sbjct: 761  FAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEE 820

Query: 499  GEGSEFWIS----LNLPKTRDDVEDLPSAPLLGHRVAVLENHELARQALQHQLEDCGLEV 554
            G+GS F  S    L   K RD  +  P   L   RV V+++++ AR  L     D  L  
Sbjct: 821  GKGSTFEFSVVCGLQDAKMRDISQ--PVHGLADKRVLVVDDNDSARHIL-----DSLLTA 873

Query: 555  TPFNSLESLTNGITSAHQTEQAIDLAVLGVTANDIPPERLNQHLWDLEHLGCKVLVLCPT 614
              FN + +++NG  +  + +Q     +L V  N +P     + L  ++ LG +  +    
Sbjct: 874  MRFN-VVTVSNGFEALSEIQQK-PFDMLFVDWN-MPGMNGIELLTRVKTLGLRGHMKSFL 930

Query: 615  TEQMLFNQSVPNPNSQLQ----AKPACTRKLRRALSDLISPRPSRSEPGEPLSSRAPR-- 668
                    ++   NS+L      KP     L  A+         R +  E   +  P   
Sbjct: 931  VTAYGREINLDGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFA 990

Query: 669  ---VLCVDDNPANLLLVQTLLEDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDG 725
               +L V+DN  N  +   LL+D G  V     G  A++ ++   FDLVLMD+QMP MDG
Sbjct: 991  GQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDG 1050

Query: 726  RQSTEAIR---QWESERSGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQV 782
              +TE IR   +W S      LP+VA+TA+AMA +    LQ+GM+D+L+KPI   +  QV
Sbjct: 1051 ITATEHIRANPRWHS------LPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQV 1104

Query: 783  VLKWTGL----ALRNQGPER------VADGLGPGVQLPVLDHEEGLRLAAGKADLAADML 832
            +  +  +    +  +  P +        + L    QL  +D E+ +    G      ++L
Sbjct: 1105 LRHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEIL 1164

Query: 833  AMLLASLEADRLAITIARDANDNNALIERVHRLHGATRYCGVPQLRAACHRAETLLKQDD 892
               + S   +  ++T   +A D ++     H L G+    G+  L       E  L+Q  
Sbjct: 1165 RHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQV 1224

Query: 893  AKAQHALDELDMAIARLASE 912
              +   L +    + ++  E
Sbjct: 1225 LPSFELLQQAQSLLTQVDDE 1244