Pairwise Alignments

Query, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 1042 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  284 bits (727), Expect = 2e-80
 Identities = 213/652 (32%), Positives = 323/652 (49%), Gaps = 32/652 (4%)

Query: 262  ETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLD 321
            + +E  N  L  AR++A  A++ K +FLA MSHEIRTP+NG++G   LL +++L+P Q  
Sbjct: 385  QEMEFSNWALSEAREKAEVAAKTKEDFLACMSHEIRTPMNGVIGILGLLGETQLSPMQKR 444

Query: 322  YLGTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLE 381
            Y+     SAD+LL ++N+ILDFSKIE+GK  +++I F+L +LL   +  ++     + L 
Sbjct: 445  YVDVASASADSLLSLLNDILDFSKIESGKFEIEAIEFDLVELLDLFVQSVSLKLEERHLP 504

Query: 382  LVSLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISV 441
            L   + +     +VGDP RL+QIL NL+ NAIKFT EG I  R      +   V L   V
Sbjct: 505  LFVDITQLQYRYVVGDPSRLRQILVNLVGNAIKFTEEGWIALRLSNRLSESGEVLLSCEV 564

Query: 442  QDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEG 501
            +DTGIG++ + +  LF  F Q D+S +R  GGTGLGL I+KRL E M GEI V S    G
Sbjct: 565  EDTGIGIAKEKLAMLFNPFIQVDSSTTRMFGGTGLGLSIAKRLCELMQGEIKVRSQQEVG 624

Query: 502  SEFWISLNLPKTRDDVEDLPSAPLLGHRVAVLENHELARQALQHQLEDCGLEVTPFNSLE 561
            S F  +L       D      A L   RV ++       + L   L   G  V+     +
Sbjct: 625  SIFSFTLTQQLADSDKMIDWRAGLSPERVTLMGQLGAFERMLGELLTSWGARVSYLEEED 684

Query: 562  SLTNGITSAHQTEQAIDLAVLGVTANDIPPERLNQHLWDLEHLGCKVLVLCPTTEQMLFN 621
            ++       +      +  V  + A     E + QH    +    +VL L    +Q  F 
Sbjct: 685  AILETDVIIYSFAPRREAFVEELNA---WRELVGQH---ADRPNTRVLPLLSYWQQTEFE 738

Query: 622  QS---VPNPNSQLQAKPACTRKLRRALSDLISP---RPSRSEPGEPLSSRAPRVLCVDDN 675
            +    VP+       +P   R+L RALSD        P      EP     P+VL V+DN
Sbjct: 739  KQDARVPH-----LGRPLNIRQLIRALSDRADEEMIEPVIEPIVEPSMPDKPKVLLVEDN 793

Query: 676  PANLLLVQTLLEDMGARVRAVESG---YAAIDAVKQDTFDLVLMDVQMPGMDGRQSTEAI 732
              N ++   +L  +G +     +G    A + A++ + + L+LMD  MP MDG Q+T AI
Sbjct: 794  KVNQMVALGMLHQLGVQADVASNGREALALLSALQGNPYQLILMDCLMPEMDGFQATAAI 853

Query: 733  RQWESERSGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKWTGLALR 792
            R+ +       LP++ALTA+AM  ++   +++GMDDYLTKP+    L + + +W  L+ +
Sbjct: 854  REGQGGSQFCALPIIALTANAMKGDREHCIRAGMDDYLTKPLVLSVLKECLYRWFSLSQQ 913

Query: 793  NQGPERVADGLGPGVQ-LP--------VLDHEEGLRLAAGKADLAADMLAMLLASLEADR 843
            N      A G  P V+ LP        + D +  L L +G   L  ++L + +  ++  R
Sbjct: 914  NY---EAALGHDPDVETLPTPIEAESQLFDRDSALALMSGDEALLDEVLQVFVEEMQDHR 970

Query: 844  LAITIARDANDNNALIERVHRLHGATRYCGVPQLRAACHRAETLLKQDDAKA 895
             A      A D  A+   VH + GA     +  L     + E   ++ D +A
Sbjct: 971  KAFIEGIAAADCTAIRSSVHAIKGAASNLSMTALVELARQLEADARRGDLQA 1022