Pairwise Alignments

Query, 242 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 1e-40
 Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 1/225 (0%)

Query: 11  VLTIEDDPVLGAYVQEHLGRCGFHVTWCQNGQQGLQMARNQVFDVVLMDILLPGLDGLSI 70
           VL ++DD  L A ++ +L   GF V    NG+Q  ++   + F ++++D++LPG DGLSI
Sbjct: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66

Query: 71  LTHLRQSHS-IPVILMSALGAEADRISGFRLGADDYLPKPFSMIELRVRIEAILRRVALD 129
              LR S++ IP+++++A G E DRI G  +GADDYLPKPF+  EL  RI+A+LRR  ++
Sbjct: 67  CRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVIE 126

Query: 130 RRPLPSLAPARDDARTLRFDDELCDVFHLGHWAGLTRSEYRLLETLHRNAEEVLSKPFLY 189
               PS      +    R +    ++F       LT  E+ +L+ L  NA E LS+  L 
Sbjct: 127 APGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKLM 186

Query: 190 QHVLQRGYAPHDRSLDMHISQIRRKLKAIGYTEREVRTVWGKGYV 234
                R Y+  +RS+D+ IS++RR L+      R ++TVWG GYV
Sbjct: 187 NMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYV 231