Pairwise Alignments

Query, 456 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 48/321 (14%)

Query: 171 GVIPGLFTLLLCVGLYRLLIVPLNQLREQANAWRADQLNTRLSHDATSRRDELGELGRAF 230
           G+I  L  L++   + R +I PL QL++ A      + + ++  D+    DE GEL +AF
Sbjct: 322 GLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQKVIVDSD---DEFGELAKAF 378

Query: 231 DHMSER---------------------LQGTVVLQQQLLRDMSHELRTPLSRLR------ 263
           + M+ +                     L+    L+ +L+  +SHELRTPL+ ++      
Sbjct: 379 NKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELV 438

Query: 264 ------VACDSEQDLTQLRERLGREIDAMQRLVEDSLQLAWLDTERAPLPQEDIQLQAL- 316
                    DS++   Q+ +     I  ++RL+E  L L+ ++     + +E + L+++ 
Sbjct: 439 LDGTMGAINDSQKKCLQVADD---NIVRLRRLIESMLDLSKIERGELEMYREKVNLRSIV 495

Query: 317 WDMLR--ENACFESDWPASRLPCLLGPDCWVRGNLNALAQALENILRNAIRHSPVGGVVS 374
            D++   +    E +   ++       D  +  + + + Q L N++ NAI+ SP    + 
Sbjct: 496 CDVIEYLKPLATEKNIKLNKEV----EDIAIEADKDRITQVLTNLIENAIKFSPANESIL 551

Query: 375 LDGRREGDYWHVWLEDQGGGIDEGDLERIFAPFTRLDGS-RPGDGGFGLGLSIARNAVQR 433
           + G  E ++ H+ + D+G GI + D+E+IF  F ++D S +   GG GLGL++ ++ V+ 
Sbjct: 552 VSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEA 611

Query: 434 QDGSLWAEN-TGQGLRVHLRL 453
             GS+W E+  G+G   H+ L
Sbjct: 612 HKGSIWVESELGKGSTFHIIL 632