Pairwise Alignments

Query, 364 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

 Score =  195 bits (496), Expect = 2e-54
 Identities = 116/350 (33%), Positives = 185/350 (52%), Gaps = 15/350 (4%)

Query: 14  GQTWIDDATLRFEAGSFNVLLGRTLSGKTSLMRLMAGLDKPNSGRILMNGVDVTQKPVRL 73
           G   +    L    G F VL+G +  GK+S++R +AGL+   SG I + G  V  +    
Sbjct: 35  GHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIHLAGRRVDNEKPAN 94

Query: 74  RNVSMVYQQFINYPTMTVFENIASPLRQAGVSNELIQSKVLETAKMLRIEKFLQRHPLEL 133
           R+++MV+Q +  YP M+V++N+A  L+  GV  + I +K+ + AK L+IE++L R P +L
Sbjct: 95  RDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTLKIEEYLDRKPAKL 154

Query: 134 SGGQQQRTAMARALVKDAELILFDEPLVNLDYKLREELRQEMRELFAARHTIAIYATTEP 193
           SGGQ+QR AM RA+V+D +L LFDEPL NLD  LR  +R E+++L       ++Y T + 
Sbjct: 155 SGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELGVTSVYVTHDQ 214

Query: 194 NEALALGGTTTILHEGRVIQSGKAAEVYHQPRTVLAAELFSEPPINLMPGRISGNEVSFA 253
            EA+ L     ++ +G + Q G  AEVYHQP +   A     P +N +P  I   ++  A
Sbjct: 215 VEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNFLPASIKQGQLHIA 274

Query: 254 NFVHFPLNVDLRPIGEGEFRFGVRPSHISLVPSNDDDLELAVTVEVAEISGSETFLHVR- 312
               +    D   +       G+RP H SL P   + +EL + ++V E  G    +H + 
Sbjct: 275 GKHCYLPQFD--AMSSENITLGIRPEHASLHPLT-NAIELKLDIQVVEPLGPNQLVHGKI 331

Query: 313 ------SEHFLLVLHLPGVHEYDVDAPIRVYIPTHKLFVFDGQG-RLVQA 355
                  +   +   +P     DV   + +++   +L +FD QG R VQ+
Sbjct: 332 IGLESEQDFIAVTAEIP----LDVHQTLPIWVALEQLHLFDQQGKRFVQS 377