Pairwise Alignments

Query, 266 a.a., sugar ABC transporter permease from Pseudomonas simiae WCS417

Subject, 281 a.a., ABC transporter for D-Glucosamine, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 2e-28
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 10/265 (3%)

Query: 10  LIYILFLLVPIYWLLNMSFKSNTEILGG-LTLFPQDFTLANYKVIFT------DPSWYTG 62
           L+  + +L P+ WLL MS     ++    L  +P D  L+ Y+ + +        ++   
Sbjct: 17  LLLAVVILAPVAWLLIMSISPAADLSAKPLAWWPSDIDLSRYRTLLSAVENSAGAAFIAS 76

Query: 63  YLNSLYYVSLNTVISLSVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFLLPFFQLY 122
            LNS+    + T+ ++ VA+PAA+A SR   +      + ++   M PP    +P +   
Sbjct: 77  LLNSIKVAGMATLAAVVVAVPAAWAVSRTPAVAWS--LYAVIATYMLPPVALAVPLYMGL 134

Query: 123 SSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFVKIFIP 182
           +  GL ++   +AL +     P   W+L+     +P+EI+  A IDG    +    + +P
Sbjct: 135 AYFGLLNSVFGLALVYLTILAPFTTWLLKSGFDSIPREIESAAMIDGARLDQILRILTLP 194

Query: 183 LIGSGIGVTAFFCFMFSWVELLLARTLTS-VNAKPIAAVMTRTVSASGIDWGVLAAAGVL 241
           L    +  +A F F+ +W E   A   TS   AK +   +         D+G++A AGVL
Sbjct: 195 LAAPVMATSALFAFLLAWDEFFYALLFTSDQRAKTLTVAIADLAGGRVSDYGLIATAGVL 254

Query: 242 TILPGMLVIWFVRNHVAKGFALGRV 266
             LP +L+   ++  +  G   G V
Sbjct: 255 AALPPVLIGLIMQRALISGLTSGGV 279