Pairwise Alignments

Query, 266 a.a., sugar ABC transporter permease from Pseudomonas simiae WCS417

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  151 bits (382), Expect = 1e-41
 Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 9/266 (3%)

Query: 9   LLIYILFLLVPIYWLLNMSFKSNTEILGGLTLF-PQDFTLANYKVIFTD------PSWYT 61
           L + +L + +P  W++  S +   EI+    ++ P+  +L  Y+ +F+       P W  
Sbjct: 22  LFLAMLVICLPGLWIVLSSLRPTVEIMAKPPVWIPETLSLDAYRAMFSGAGQGGVPVW-D 80

Query: 62  GYLNSLYYVSLNTVISLSVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFLLPFFQL 121
            + NSL     +TVI+L++ L   YAF+RYRF     +F   +  R  P     LP F L
Sbjct: 81  YFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFMLTRAVPGIALSLPLFML 140

Query: 122 YSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFVKIFI 181
           Y+  G+ DTH ++ L +   NVP  +W+++GF   VPK++ E A IDG +  + F ++  
Sbjct: 141 YARTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEAAQIDGCTPWQAFWQVEF 200

Query: 182 PLIGSGIGVTAFFCFMFSWVELLLARTLT-SVNAKPIAAVMTRTVSASGIDWGVLAAAGV 240
           PL G GI     F F+ SW E  LA  +T SVN+K +   +    +   IDW  + A  V
Sbjct: 201 PLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPVGLLDYTAEFTIDWRGMCALAV 260

Query: 241 LTILPGMLVIWFVRNHVAKGFALGRV 266
           + I+P + + + ++ H+  G   G V
Sbjct: 261 VMIVPALTLTFIIQKHLVSGLTFGAV 286