Pairwise Alignments

Query, 266 a.a., sugar ABC transporter permease from Pseudomonas simiae WCS417

Subject, 276 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) from Sinorhizobium meliloti 1021

 Score =  144 bits (362), Expect = 3e-39
 Identities = 86/271 (31%), Positives = 140/271 (51%), Gaps = 6/271 (2%)

Query: 1   MSKRKVIPLLIYILFLLV--PIYWLLNMSFKSNTEILGGLTLFPQDFTLANYKVIFTDPS 58
           ++KR     L+ ++ L+   P Y+ +  S KS T +   +  +P D +LANY  IF+  +
Sbjct: 5   IAKRTAFYALVAVIILVAVFPFYYAILTSLKSGTALFR-IDYWPTDISLANYAGIFSHGT 63

Query: 59  WYTGYLNSLYYVSLNTVISLSVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFLLPF 118
           +     NSL   +L   ISL +A+ AAYA +R RF G   L   +L+  M P    L   
Sbjct: 64  FVRNLGNSLLVATLVVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQIAVLAGL 123

Query: 119 FQLYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFVK 178
           F+L   +G+F+T +A+  ++ +F +P  VW+L  FM  +P EI+E A +DG S      +
Sbjct: 124 FELIRFVGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPIEIEEAAIVDGASPWVVITR 183

Query: 179 IFIPLIGSGIGVTAFFCFMFSWVELLLARTLTSVNAK---PIAAVMTRTVSASGIDWGVL 235
           +F+PL+   +  T    F+ +W E L A T TS N +   P+A  +    S   I WG +
Sbjct: 184 VFMPLMWPALVTTGLLAFIAAWNEFLFALTFTSSNTQRTVPVAIALLSGGSQFEIPWGNI 243

Query: 236 AAAGVLTILPGMLVIWFVRNHVAKGFALGRV 266
            AA V+  +P ++++   +  +  G   G V
Sbjct: 244 MAASVIVTVPLVVLVLIFQRRIISGLTAGGV 274