Pairwise Alignments

Query, 266 a.a., sugar ABC transporter permease from Pseudomonas simiae WCS417

Subject, 271 a.a., mannitol ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  141 bits (355), Expect = 2e-38
 Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 10/273 (3%)

Query: 1   MSKRKVIPLLIYIL------FLLVPIYWLLNMSFKSNTEILGGLTLFPQDFTLANYKVIF 54
           MS  K  PL + +L       L  PI+W+   +FK+ ++      +F    TL  ++ +F
Sbjct: 1   MSDPKKSPLWVAVLGWACAIVLFFPIFWVAVTAFKTESQAYTPSLVFLP--TLETFREVF 58

Query: 55  TDPSWYTGYLNSLYYVSL-NTVISLSVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAV 113
           +  S Y GY+ +   VSL +T++SL +A+PAAY+ + +     + L  W+L+ +M P   
Sbjct: 59  SR-SHYLGYVQNSLIVSLGSTLLSLLLAVPAAYSMAFFPTGRTQKLLLWMLSTKMMPAVG 117

Query: 114 FLLPFFQLYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFP 173
            L+P + +  + GL DT   + + + L N+P+AVW+   + + VPKEI E A IDG +  
Sbjct: 118 VLIPIYLMAKNTGLLDTVTGLTIIYTLINLPIAVWMAFTYFNDVPKEILEAARIDGANAW 177

Query: 174 KFFVKIFIPLIGSGIGVTAFFCFMFSWVELLLARTLTSVNAKPIAAVMTRTVSASGIDWG 233
           +  + + +P    G+  TA    + SW E   +  LTSVNA P+   +    +  G+ W 
Sbjct: 178 QEMIYLLLPTAMPGLASTALLLVILSWNEAFWSLNLTSVNAAPLTVFIASYSNPEGLFWA 237

Query: 234 VLAAAGVLTILPGMLVIWFVRNHVAKGFALGRV 266
            L+AA +L I P M + W  +  + +G   G V
Sbjct: 238 KLSAASLLAIAPIMALGWLAQKQLVRGLTFGAV 270