Pairwise Alignments

Query, 394 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 386 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (411), Expect = 1e-44
 Identities = 115/380 (30%), Positives = 191/380 (50%), Gaps = 12/380 (3%)

Query: 15  VIALALAAFVFNTTEFVPVGLLSAIGASFDMPVSSVGLMLTIYAWIVSLTSLPVMLLTRN 74
           ++ALA+AAF   TTEFV +GLL  +     + +   GL++T YA  V   +  + + T N
Sbjct: 5   LLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPQAGLLITGYALGVVFGAPILAIGTAN 64

Query: 75  VERRKLLIVLFCMFIVSHILSSVATSFGILMLSRIGIALSHALFWSITASLAVRLAPEGK 134
           + R+  L+ +  MFI+ ++L ++A ++  LM +R+  AL H  F+ I + +A  L    K
Sbjct: 65  MPRKATLLGMTLMFILGNVLCALAPNYATLMAARVITALCHGAFFGIGSVVAAGLVAPNK 124

Query: 135 QVQALGLLATGTSLAMVLGIPLGRLLGEAMGWRTTF---LVIGAFAA-ALVFWLARTLPL 190
           + QA+ ++ TG +LA VLG+PLG  LG+  GWR+TF    VIG  AA A   WL + +P+
Sbjct: 125 RAQAIAMMFTGLTLANVLGVPLGTALGQYAGWRSTFWAVSVIGVIAAIAQWVWLPKDIPM 184

Query: 191 LPSQNSGSLRSLPLLFKRPALVALYVLTAMTVTAQFTAYSYIEPFVEGVAGMSGSAVTLI 250
                +       +L K   L+AL  ++ +  T+ F+ ++YI P ++ + G+S   +T++
Sbjct: 185 ---DKANLASEFKVLGKANVLLAL-GMSVLASTSLFSVFTYIAPILQDITGVSPHGITVM 240

Query: 251 LLVFGGAGIIGSLLFSLVHRFNPHVFVVGAVFILAACLALLLPLSGAESYLVVLSVFWGM 310
           LL+FG     GS L   +        +VG    +   LA     S +     +  V WG+
Sbjct: 241 LLLFGVGLTAGSFLGGRLADRRLLPSLVGMALAVVLVLAAFSQTSQSVIPAAITLVLWGI 300

Query: 311 AIMGFGLAMQSKVLVLAPDATDVAMAMFSGIYNIGIGGGALVGSWV---GSQFG-FAWIG 366
                   +Q  ++  A +A ++   +    +N+G   GA +G  V   G+      W G
Sbjct: 301 FAFALCPILQLLIIDQAFEAPNLGSTLNQSAFNLGNAAGAWIGGLVVASGADLADLPWTG 360

Query: 367 AAGGLLAALALIGYCLAIRR 386
           AA G L  L  + +    RR
Sbjct: 361 AAVGGLTVLTALFFIHRQRR 380