Pairwise Alignments

Query, 251 a.a., porin from Pseudomonas simiae WCS417

Subject, 228 a.a., MIP family channel protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  273 bits (698), Expect = 2e-78
 Identities = 138/227 (60%), Positives = 168/227 (74%), Gaps = 1/227 (0%)

Query: 1   MQKRLTAEFIGTFWLTFGGCGSAILAAAFPELGIGFVGVSLAFGLTVLTMAYAVGGISGG 60
           M KR  AEFIGT+WL FGGCG+A+LAA  PE+GIG+VGVSLAFGL+VLTMAYAVGGISGG
Sbjct: 1   MFKRTLAEFIGTYWLVFGGCGAALLAAGVPEVGIGWVGVSLAFGLSVLTMAYAVGGISGG 60

Query: 61  HFNPAVTLGLWAGRRVAAGEVLPYIAAQVAGAIGASAALYLIANGQPDFA-IGGFAANGY 119
           HFNPAVTLGL    R  A ++ PY  AQ+ G   A+  L++I +GQ +FA +G FA+NGY
Sbjct: 61  HFNPAVTLGLTIAGRFEAKDIPPYWIAQLLGGAAAAGTLFVIMSGQAEFASVGSFASNGY 120

Query: 120 GPLSPGLFDMKAALLAECIATFFFLFIIMRVTSSGAVPGFAPIAIGLALTLIHLVLIPVT 179
           G  SPG F M + ++AE + T  F+ +I+  TS     GFAPIAIGL LTLIHL+ IP+T
Sbjct: 121 GVASPGGFGMMSGMIAEVVLTAVFVIVILGATSHMVPEGFAPIAIGLCLTLIHLISIPIT 180

Query: 180 NTSVNPARSTGPALFAGGEYLAQLWLFWLAPMVGGVMGALAARSLGE 226
           NTSVNPARST  A++A G  L QLWLFW AP+ G V+GAL   +L E
Sbjct: 181 NTSVNPARSTAMAIYADGPALGQLWLFWAAPLAGAVIGALIWAALDE 227