Pairwise Alignments

Query, 314 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 328 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  116 bits (290), Expect = 8e-31
 Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 29/324 (8%)

Query: 1   MSIRRPLAAVAGLLAFSV----AVSAEAQE-----TVRIGYQKSSTLITLLKTQGTLEKA 51
           MS RR L A AGL  + +    +  A AQ      T+RI + K     TLL+T G     
Sbjct: 5   MSRRRLLQAGAGLGLYGLLGPGSARAAAQADLSGVTLRIAFYKGLHK-TLLETAG----- 58

Query: 52  LKADNIDVSWHEFPSGLPLLEALNVGNVDISADVADTVPIFAQAAQAKLTYFAQEAPSPS 111
           L A    + W EF SG+  +E +NV  +D+ +  ++T   F   ++A++ + A      +
Sbjct: 59  LAATPYKIDWKEFNSGVQHIEGINVDALDLGSG-SETSAAFGVRSKARVKFIAVYREDLN 117

Query: 112 AQAIVVRKDSPIQQLADLKGKKIAVTKAAGTHYLLIAALAQTGLEFSDITPAYLSPADGR 171
            Q   V+KDS I ++ADLKGK++   +   +HY L   LA+ GL F+DI   +L+P DG 
Sbjct: 118 NQGTFVQKDSNINRVADLKGKRVGYVRGTTSHYYLYKQLAEAGLSFNDIKATHLAPTDGL 177

Query: 172 AAFENNKVDAWVTWEPFLTSVQRQLPTRTLADGAGLASYKRYYLTGTPYAKAHP---DVL 228
           +AF    +DAW  W       + +   RTL  G G  S   + ++  P A   P     L
Sbjct: 178 SAFARGDLDAWAIWGYNGQLARSKYGARTLKTGVGYLS-GNFLISANPSAIDDPLRHAAL 236

Query: 229 KVVYAQLEKTGQW----VKTHPQDAAKVLG-PLWGNLDVATVEAANAHRSYQVQPVTIDQ 283
                +L+K   W      T+ +  ++  G P+   LD+      N ++ Y +   +   
Sbjct: 237 ADFLLRLQKAYAWSNANYPTYAEAQSRDTGVPVEAILDLFN----NRNQDYSLIANSDAA 292

Query: 284 LGEQQKIADAFFKAGLLPKAVDAK 307
           +   Q++AD F K G+    VD K
Sbjct: 293 VQSHQEVADVFTKIGVFDAPVDVK 316