Pairwise Alignments

Query, 312 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 321 a.a., ABC transporter, substrate-binding protein, aliphatic sulfonate from Pseudomonas syringae pv. syringae B728a

 Score =  222 bits (566), Expect = 8e-63
 Identities = 135/307 (43%), Positives = 176/307 (57%), Gaps = 8/307 (2%)

Query: 6   LIVAASLLFAATAAHAEQTLDISYQRSSTLWILLKQNGHLEQRLKPLGFTVNWHEFSTG- 64
           L  AA  L A T A AE  L I YQ+  TL +LLK  G LE+RL   G  V W EF  G 
Sbjct: 13  LFAAAVALGAVTQAQAED-LRIGYQKYGTL-VLLKAKGSLEKRLAEQGVKVQWTEFPGGP 70

Query: 65  -LLSSLNAGSVDLHADVADAFALFTQAADAPLTYYAQENSSSSAQAIIVQDQSPIHSIAD 123
            LL  LN GS+D      +   +F QAA A L Y A E  + +++AI+V   SPI S+ D
Sbjct: 71  QLLEGLNVGSIDFGV-TGETPPVFAQAAGADLLYVAYEPPAPTSEAILVPKDSPITSVKD 129

Query: 124 LKGKTVAVSKGSGSHYLLISALRKAGLTLADITPRYLEAPDGGAAFANGSVDAWVIWDPF 183
           LKGK V ++KGS  HYLL+ AL  AGL   DI   +L   D  AAF  GSVDAWVIWDP+
Sbjct: 130 LKGKKVVLNKGSNVHYLLVKALEDAGLKYTDIQTVFLPPADARAAFERGSVDAWVIWDPY 189

Query: 184 LATQQLDHHVRVIADGKDGLADYNRFYMATTRFAKAHPDVLQVTFDTLRETGQWVKAHPK 243
            A  +     R + DG  G+ D ++FY+AT  +A+ +P V+Q   + +R  G+W KA+P 
Sbjct: 190 QAAAEKQLQARTLKDG-TGIVDNHQFYLATKPYAQKNPKVIQALVEEVRAVGEWSKANPD 248

Query: 244 EAAEILGPLWGNIAPATVERANSRRSYDIIPVKVENLAEQQRIADTYYAAKLIPKPLKVS 303
           E    + PL G  A  T+     R+ Y    +    +A QQ+IADT+Y  KLIPKPL ++
Sbjct: 249 EVTRQVAPLLGLPADITLTSV-KRQGYGAQFLTPPVVAAQQKIADTFYQLKLIPKPLSIA 307

Query: 304 AITVWTP 310
            + VWTP
Sbjct: 308 DV-VWTP 313