Pairwise Alignments

Query, 352 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 338 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 20/230 (8%)

Query: 59  LKLAVNLNAVCLAPVVIAHGQGFFTKHNLDVELVNFGN----STEVLLEAIATGKADAGV 114
           +K+AV+   +  +P  +A   GFF +  +DVELV        S  +   A++   A   V
Sbjct: 43  IKIAVSQTPLS-SPFYLADQLGFFKQQGIDVELVACSGGVQCSQALFQGAVSYATASESV 101

Query: 115 GMALRWLKALEQGFDVKLTAGTHGGCLRLLSAVNGAVAKLEDLKGKAIGVTDMASPDRNF 174
            M   + +   Q F +  +       L+LL+  +  +  + DL  K +G+   ++ +  F
Sbjct: 102 AMFSSFER---QDFLILASFVQSDNDLKLLALESETIRSVADLHNKRVGMIRASASEFYF 158

Query: 175 FSILLKKH--GVDPVRDVEWRLYPADLLGTALERGEVQAVSGSDPFMYRLIKSGVARELS 232
            S+LL  +  G+ P+  V      AD L   L   ++ A+S  +P+ Y++   GVA E  
Sbjct: 159 DSLLLANNLKGI-PIDKV---YGTADQLYQQLFDKQLDAISIWEPWGYKI---GVAAESK 211

Query: 233 -TNL-VEEYANLSCCVVGVTGKLVREDKRVVVALTQAILEAHDYSVQHPE 280
            TNL +     LS  ++ +      E+K+  +A+ +A+ +A D+  Q+PE
Sbjct: 212 VTNLSLPGIYTLSFNLLTMK-PTTEEEKQRSLAILKALKQAIDWIHQNPE 260