Pairwise Alignments

Query, 352 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., putative sulfonate/nitrate transport system substrate-binding protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 23/229 (10%)

Query: 72  PVVIAHGQGFFTKHNLDVELVNFGNSTEVLLEAIATGKADAGVGMALRWLKALEQGFDVK 131
           P+++A   G+F    L+V+LV   +  +   + +A GKAD  VG   + +  + +G  + 
Sbjct: 61  PLIVAQDLGYFKDAGLEVDLVAPADPNDPP-KLVAAGKADIAVGYQPQLVMQVAEGLPLM 119

Query: 132 ---LTAGTHGGCLRLLSAVNGAVAKLEDLKGKAIGVTDMASPDRNFFSILLKKHGV--DP 186
                  T   CL +L   +G +  + DLKG+ +G +     D      +L   GV  D 
Sbjct: 120 RFGTLVATPLNCLVVLK--DGPIKSVADLKGRKVGFSVGGFEDA-LLGAMLDNAGVKADE 176

Query: 187 VR--DVEWRLYPADLLGTALERGEVQAVSGSDPFM-YRLIKSGVARELSTNLVEEYANLS 243
           V   +V + L PA +       G+V AV G  PF  + L +  +A    T    E   + 
Sbjct: 177 VTLVNVNFSLSPAVI------SGQVDAVIG--PFRNFELNQMDLAGHPGTAFYPEEHGVP 228

Query: 244 CC--VVGVTGKLVREDKRVVVALTQAILEAHDYSVQHPEEVAKGFQAHA 290
               +V VT   ++ D R+V A   A+     Y V HPEE    F+AH+
Sbjct: 229 LYDELVFVTNIALKGDPRLV-AFLDAVERGTHYIVNHPEEAWTLFKAHS 276