Pairwise Alignments

Query, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  167 bits (423), Expect = 3e-46
 Identities = 109/313 (34%), Positives = 161/313 (51%), Gaps = 7/313 (2%)

Query: 1   MKTVAMALFPDFLLLDMAGPLEVFSIANRYLPAAEHYRILTLGTEPGPLRASNGVAVQTD 60
           M  +   +FP F L+  A  +  F +AN  L     Y I  L    G +++S G  V T 
Sbjct: 12  MHRIGFVVFPRFQLMGFAA-VTAFEMANLALGETV-YEIELLSEAGGEVKSSAGFGVLTK 69

Query: 61  LLLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGLLD 120
                   AYD ++   G        P L+ + + +   ARR  + CTGAFVL  +GLLD
Sbjct: 70  TF---DHTAYDTVMFGAGV-QIEPMTPGLVEFARRSFETARRVAAPCTGAFVLAESGLLD 125

Query: 121 NHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGKQV 180
             R TTHW +  +L   FP   VE DRI++ DG + TS G+TA IDLAL++V +D+G+ V
Sbjct: 126 GRRATTHWAFARQLQDRFPAVKVEEDRIFIVDGSVWTSAGMTASIDLALAMVEKDYGQGV 185

Query: 181 AVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAALAG 240
           A  VA+ L+V  +R GGQ+QFS +   + P+   I R  ++   +L    ++E +A  AG
Sbjct: 186 ARSVARKLVVYHRRAGGQSQFSAL-LELEPKSDRIQRSIDYAKANLRRGLSVEELADAAG 244

Query: 241 MSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRFLF 300
           +SAR F+R F  E   +P   ++  R++ AR ++E     +  +A   GF     MR  F
Sbjct: 245 LSARQFSRAFRAETGQSPAKAVETLRVEAARLMMEQGRHSMDVIAEETGFAIADRMRRAF 304

Query: 301 SEKLGLNPTQYRQ 313
              LG  P   R+
Sbjct: 305 LRTLGQPPQTIRR 317