Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  217 bits (552), Expect = 3e-61
 Identities = 113/289 (39%), Positives = 179/289 (61%), Gaps = 2/289 (0%)

Query: 1   MNPFEDMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTP 60
           ++  + M+ F  V++ GSFT AA++LGLS Q VS+ + QLE+ L VRLLNR+TRR++VT 
Sbjct: 3   LDRIDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTE 62

Query: 61  LGQSYYESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRRYPQ 120
            G++Y+E   ++L ++E+++  +   +    G +++SAP+SF + HL   L  F +++P 
Sbjct: 63  AGRAYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPD 122

Query: 121 VAVEVDLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPHK 180
           V +++ L+D+ VDL+ +G D+ LRIG L  S+LIA+++  I  V CASP+YLA RG P  
Sbjct: 123 VRLDITLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPKT 182

Query: 181 PDDLAEHDCLPYGHG--RQVQWRFKGKVQALNVSGRMRVNNGDLLRDTAIAGLGVTYLPT 238
           P DL  H+ L + +        RF     AL +   +  NNGD+L + AIAG G+   PT
Sbjct: 183 PADLIHHNYLHFSYSDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRGIVVQPT 242

Query: 239 FIVGDALKDGRLVTVLDEFAPEALTLSAVYPQHRQGSRPVQALVEFLRE 287
           F+V  AL+ G+L  +L ++ PE   L AVY   +  +  V+  V+ L +
Sbjct: 243 FLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQ 291