Pairwise Alignments

Query, 345 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 345 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  395 bits (1015), Expect = e-115
 Identities = 194/338 (57%), Positives = 255/338 (75%)

Query: 7   WYEADSRFIPGHYQPATLIDLALSRDIDSHRLLRGTGLFHEDILAGTARLSPQQFLGLIG 66
           WY+ D+RFI  H+QPA L+DLALSR IDSH LLRG+GLF+ED+ +G AR+SP+Q L LIG
Sbjct: 7   WYDWDTRFIAAHHQPAVLLDLALSRGIDSHALLRGSGLFYEDVASGRARVSPEQLLTLIG 66

Query: 67  NSRKLLDADDSSFLFGQRLLPGYYGAASHALGHAQNLHQALDILIQQQVLLSPLVTLQLE 126
           N+ +LL A DSSFLFGQRLLPG+YG  S AL +A NL QAL+ L Q + LL PL+  +L 
Sbjct: 67  NTERLLGAADSSFLFGQRLLPGHYGDVSLALANACNLEQALERLCQFRALLCPLLAPRLL 126

Query: 127 LDEHHAYLYWLDSCGAGEHWRFLLEASMTSLVAMSQWLSGERLPWTASFSHAEPRYVEQY 186
           LDE   ++YWLD+  AG H RFL+EA +T++VA+ +  SG RLPW   F++++PR+VEQY
Sbjct: 127 LDEQQLHIYWLDNGSAGRHQRFLIEAHLTAIVALCKRGSGLRLPWRFQFAYSQPRHVEQY 186

Query: 187 WVHLGEGTRFERPLDMLSIPREHLIRAWPGASATAGQVARQHAREQIEQLGFTSSFLDCL 246
           WVHLG+  +F+R L +LS+PRE+L + WP ASAT GQVA+Q +++QI+ L    +FLD  
Sbjct: 187 WVHLGDALQFDRHLTLLSLPREYLHQPWPDASATVGQVAQQASQQQIDALEGPCAFLDAF 246

Query: 247 YDYLREQVRQPPSLEQAAHAFAMSPATLKRKLHKHATGFQQQVDRVRKQVALHLYQVKGY 306
           Y YL + +R+P +LE+ A AFAMSPATLKRKL KH T FQ+Q+D VR  VAL+LYQ +G 
Sbjct: 247 YQYLHDHIREPLNLERVAVAFAMSPATLKRKLAKHGTHFQEQLDLVRTHVALYLYQSQGL 306

Query: 307 SNDEVAAYLNFNDAANFRRSFKRWTGSTPHLIRQLFNS 344
            N+ VA +L FND  NFRR+FKRWTG  P  ++ LF++
Sbjct: 307 GNEAVARHLGFNDTTNFRRAFKRWTGVVPSGLQPLFDA 344