Pairwise Alignments

Query, 304 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 512 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 23/234 (9%)

Query: 71  NYLALGLSCIFFSWWIDSLDEFIRLP--DSITWDHWLES--GPMPVGMILLTIGIYHWHR 126
           +Y A G      S W+D    +I +   D    D W ++  G + +   +  +G+     
Sbjct: 285 SYYADGQKVYLNSRWVDEFQWYIIVEQKDEFNHDIWFKATLGNLAISAFV-ALGVLGL-- 341

Query: 127 EQLAISAQMEKR--ERLFREHRLFDKLTPLAGADYLKRQLADSLQDSHTQQQPLSLLALD 184
                 AQM  R  ++   +  + DKLT        +  + D++  ++ +  PLSL  +D
Sbjct: 342 ------AQMSFRGYQKRLEDMAVRDKLTGAYNRQVFEELVDDAISLANKESHPLSLAVID 395

Query: 185 LDNFAAINQAYGHAEGDAVLQALSHLLLLNLRRQDLLCRLAGDRFVVLLPNTGERQAKAL 244
           LD+F  +N  YGH  GD VLQ +  L   ++ +   LCR  G+ FVVLLP+  +++A   
Sbjct: 396 LDHFKQVNDNYGHPAGDLVLQRVVALCQRHIAQVGTLCRWGGEEFVVLLPHMTQQEA--- 452

Query: 245 ALELQQAVRGLAHKTRLHGERLQLAATTAVVM-ALNEPPHDLLKRLNLALARAK 297
                Q +  +  +  +H  + Q+  +  VV    NE    L  R + A+  AK
Sbjct: 453 ----YQRMESIRAEIAMHASQPQVTVSIGVVQYQQNESLLHLFNRADQAMYTAK 502