Pairwise Alignments

Query, 257 a.a., polysaccharide deacetylase from Pseudomonas simiae WCS417

Subject, 251 a.a., protein of unknown function DUF610, YibQ (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (401), Expect = 7e-44
 Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 18/251 (7%)

Query: 1   MRFALIIAVLCSLAGVAHATPAGEPH--KAYLTLIIDDLGQNLPRDRRVLALPGPVTTAI 58
           MR  L++AVL +            PH   A +++IIDD+G     D  VLALP  +T ++
Sbjct: 1   MRLLLLLAVLFTT-----------PHCFAAQVSIIIDDIGYR-QTDEAVLALPSDITLSV 48

Query: 59  MPDTPHAAEFAREAHKAGKIVILHMPMDPATG----PFAWHPELSIEELGKRLDAAFQAV 114
           +P TP     A  AH  G  ++LH+PM    G    P     ++S + L + +D AF++V
Sbjct: 49  LPHTPLGERLAAIAHDKGHEIMLHLPMQALNGKEMGPGGLTNQMSEQALKRAVDDAFKSV 108

Query: 115 PYTAGINNHMGSRMTAQPAAMAWLMAELQRRNKFFVDSRTSAQTVAAAEAQKIGLAHVSR 174
           PY  G+NNHMGS +T   A M WLM  L++++ +FVDS T+  + A+  A ++G+  + R
Sbjct: 109 PYAKGVNNHMGSLLTQLDAPMTWLMESLKQQDNYFVDSMTTRYSKASDAANRLGIPLLRR 168

Query: 175 DVFLDDERTEAAITTQLQTAIKLAHKQGSVVMIGHPYPQTLAVLERELPKLKAQGVDWIN 234
            +FLD++ +   +  Q    I+LA+K+G +++I HPYP+T++ L+  L +L  +G+  +N
Sbjct: 169 QLFLDNDVSPQGLERQFNQLIQLANKEGQLIVIAHPYPETISFLKANLSRLSDEGIALVN 228

Query: 235 IKLMISVRSNQ 245
              ++  R  Q
Sbjct: 229 TSRLLPYRLAQ 239