Pairwise Alignments

Query, 257 a.a., polysaccharide deacetylase from Pseudomonas simiae WCS417

Subject, 251 a.a., protein of unknown function DUF610, YibQ (RefSeq) from Shewanella sp. ANA-3

 Score =  145 bits (366), Expect = 8e-40
 Identities = 79/218 (36%), Positives = 125/218 (57%), Gaps = 5/218 (2%)

Query: 28  AYLTLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHAAEFAREAHKAGKIVILHMPMDP 87
           A + LIIDD+G     D  VL+LP  VT +++P TP + + A+ AH  G  ++LH+PM  
Sbjct: 20  AQIALIIDDIGYR-HTDEAVLSLPSAVTLSVLPHTPLSNKLAKAAHAKGHEIMLHLPMQA 78

Query: 88  ----ATGPFAWHPELSIEELGKRLDAAFQAVPYTAGINNHMGSRMTAQPAAMAWLMAELQ 143
               A G       +S  ++   + AA  +VP+  G NNHMGS +T     M W+M  L+
Sbjct: 79  LNGKALGVGGLTNNMSEAQIRSSVLAAIASVPFAKGANNHMGSLLTQLDDPMLWVMDTLK 138

Query: 144 RRNKFFVDSRTSAQTVAAAEAQKIGLAHVSRDVFLDDERTEAAITTQLQTAIKLAHKQGS 203
           ++  +FVDS T+  T A  +A  +G+  + R +FLD++ + AA+  Q    I  AH QGS
Sbjct: 139 QKQLYFVDSMTTKFTKAGDKADSLGVPLLRRKLFLDNDVSAAALEKQFNLMISQAHSQGS 198

Query: 204 VVMIGHPYPQTLAVLERELPKLKAQGVDWINIKLMISV 241
           +V I HPYP+T+  L+  L +LKA+G++ +    ++ +
Sbjct: 199 LVAIAHPYPETIHFLKTNLARLKAEGIELVPTSSLLPI 236