Pairwise Alignments

Query, 368 a.a., secretion protein HylD from Pseudomonas simiae WCS417

Subject, 384 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  167 bits (422), Expect = 6e-46
 Identities = 121/356 (33%), Positives = 179/356 (50%), Gaps = 7/356 (1%)

Query: 3   PLPLRLLTPLALLIILNGCNSKADTAAETPLPRPVLAAKVEAAGTQQSA-YTGVVAARTE 61
           P   RLLT + L  +L+GC+ +     ET   RPV   ++ AAG  +   Y+G V ARTE
Sbjct: 10  PFVARLLTAILLGAVLSGCSQEKVETKETI--RPVKVVEIAAAGEPRELHYSGSVRARTE 67

Query: 62  SDLGFRVSGKVIERKVDPGQHVSRGDTLLVLDIGDFELALRSAKNRVHAAQAQLRQRRDD 121
            +LGFRV GK+ ER V+ G  V  GD L  +D  D+ LA+ SA+  + AA+ Q++     
Sbjct: 68  MNLGFRVGGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQTTALA 127

Query: 122 ENRYQRLASTGAVSRQIFDQSATLLRVAEAELASAQSDASQIENRRTYSVLKADGDGIIT 181
           + R ++L +    S+   DQ+  L   A +   +A S  SQ +N+ +Y+ LKAD +GI+T
Sbjct: 128 KLRAEQLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVSYTDLKADQNGIVT 187

Query: 182 DVRVDRGQVVAEGQIVARLAHDGAREAIVNLPE-NQRDQAAQKALAFPFGAPDQAV-TAT 239
            V  D GQVV  G  V  +A DG +E  + +PE +  +    K +   F + D  V    
Sbjct: 188 AVNADIGQVVGTGTPVVTVAVDGEKEVEIAVPEIDVTEFKPGKPVGVRFWSNDMLVLDGH 247

Query: 240 LRELSASADPTTRTYRARYVLHGAVDRFALGSTITVRLQGNGQAQQTRVPIGALLDSGQG 299
           +RE+S SAD  +RT+  R  L    +R  LG T TV       A    +P+ AL      
Sbjct: 248 VREVSGSADQRSRTFSVRVSLPND-ERVLLGMTATVEAAAASSAPLVSIPLSALSKKDGQ 306

Query: 300 TGVWLIGAD-DKVSFAPVKVASLGQEDALLDSGVSPGQVIVALGAHLLHSGDPVRL 354
             VW++  D   V   P+K+A        +  G+  G ++VA G   +     VRL
Sbjct: 307 NIVWIVDRDFSTVHARPIKLADFADNGVRVVDGLGAGDLVVAAGTQFMAEDLKVRL 362