Pairwise Alignments

Query, 401 a.a., major facilitator transporter from Pseudomonas simiae WCS417

Subject, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (347), Expect = 3e-37
 Identities = 101/373 (27%), Positives = 174/373 (46%), Gaps = 16/373 (4%)

Query: 8   SRSLLFLLVALTALGEVSTQLIIPGLGAIEQALAAPAGSSLMALSAFVAAFGLGQLLFGP 67
           S+  + LL  L     ++  + +P L  I QA       +   ++ F+ A G+GQL  GP
Sbjct: 10  SKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGP 69

Query: 68  LSDRIGRRPVLIGGLVLYGLATLSMLLVDDIEHFIAARVLQGLGACAALVLARTVVRDVW 127
           L+D+ GRR V +GG+ +Y L+ L       IE  + AR+LQGLGACA  V A   VRD++
Sbjct: 70  LADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLF 129

Query: 128 KAEAGPALALTMIGMLYAIV-----VAPMVGGLLIKWLGWRAPIMLALAIGSVVLLVVLL 182
               GP  +  MI  L   +     +AP++G  L +  GWRA          +V L + L
Sbjct: 130 ----GPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMAL 185

Query: 183 FFRESNHYLDPKAGHWRSLGGQYLDLLRGRQYRAFAVALACTYGAMFAVIAGSSAVFINL 242
             +ESN Y+  +   ++    +Y  +L+   +   A         + A +  +  + +  
Sbjct: 186 RLQESNPYMGSRPAVFKL--SRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMER 243

Query: 243 LGFSSLEYGINFGLIVSMLIVGSTYTRRNIMRLGPQRIVTMGVAMVAAGGVSAVVIYALF 302
           L  S  E+   FG+   + I+      + + +LG +  + +G+  +   G  ++++    
Sbjct: 244 LQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAG--SLMLVLRN 301

Query: 303 GLSVLGLDIPIALVTLGGGLVLPGSVTGGVMPNAHRAGLAAGLMGFAQMFGATCSGVLLS 362
             S L   +P+ L ++G   +L  +    + P   +AG AA L+G  QM G   SG+L+ 
Sbjct: 302 QASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSG---SGLLVG 358

Query: 363 LLRDGSATPMIVI 375
            L+     P ++I
Sbjct: 359 TLQRIMPEPQLLI 371