Pairwise Alignments

Query, 481 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 449 a.a., Cyclic nucleotide-binding from Synechococcus elongatus PCC 7942

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 19/361 (5%)

Query: 117 LIAIIAAMAYVLDLPVKGVLATSGAVAIIVGLALQSTLSDVFSGIVLNTTKPYQIDDWIS 176
           LI II   A  +DL    VLA  G + + + L LQ   +  FSGI L   +P ++ D +S
Sbjct: 78  LILIIGLQAIGVDLSSLTVLA--GVLGLGLSLGLQRLAASFFSGITLLIEQPIKVGDLVS 135

Query: 177 IDGTEGRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKIINFSRPADMFGLSVSLQVSPHA 236
           +DG  G V  I +RAT ++T      ++PN     + IIN+S       + + + V+   
Sbjct: 136 LDGVLGTVEKISFRATAVRTLDHVHVIVPNDRLVDSNIINWSYQNTASRVHLPISVAYGT 195

Query: 237 RPQTVIEALERAMQGCRPLLGNPAPSVAFKASASGGVEYEISGFVPAMSLKREVRNQL-- 294
            P  + +AL    +    +L  PAP+V F++     + +E+  +     L   +++ L  
Sbjct: 196 DPLWLTDALLTVARQDSRVLTQPAPTVWFRSFGDSTLNFELLFWTDRPELIEPIKSDLNF 255

Query: 295 ---YDLAFRHLQAAGVGLL-----SATESSTPPAMSAARALLERSSIFSTLRQEEKDTFS 346
               +   R +Q     L+     S T S  P       +LL R  +F      +     
Sbjct: 256 RIASEFERREIQIPFPQLVLHRHRSVTTSELPD--DYLPSLLRRVDLFRDYDDSQIRWLI 313

Query: 347 QNMTLNAYRAGEMILPAGEVSDHLFIVESGVVSVMLTKAGRKVEAGRMGPGEVIGEAGIL 406
           +         G+++   GE+ +  +++ +G  SV +   GR+     +  G   GE  ++
Sbjct: 314 EKGRRRTCVVGDVLCREGELGEEFYLILNGRFSVQV--KGREEAIATLESGNFFGELAVM 371

Query: 407 SDQAALADFSAKTFCTLYRIEKEYLKPCLDARHDISEAMKTLLDFRLHAAQALTQEAPVV 466
            D    A   A    TL+ +++  L+  L+   ++S+ M   L  R    Q LT    + 
Sbjct: 372 LDIPRTATVVALEPGTLFVVDRNNLRHLLERCPNLSQVMAEQLAQR---QQVLTNAGLLT 428

Query: 467 P 467
           P
Sbjct: 429 P 429