Pairwise Alignments

Query, 481 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 297 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 58/256 (22%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 45  VYSAVLFNDGMNPMQVAPYADNTALHLSATALQIGWWLFAARTLTVLLGAVMMQRVGHTG 104
           + S VLF  G + + V+       L L A       W    R   ++  A++ ++V    
Sbjct: 9   ILSFVLFTYGDSAITVSQVLQVPLLLLLA-------WFIVTRIGKLIRRALLARKVAPDA 61

Query: 105 RLLQDLVGAVIFLIAIIAAMAYVLDLPVKGVLATSGAVAIIVGLALQSTLSDVFSGIVLN 164
             L   +  ++ +  I+     +L++P+K     SGAVAI VG   Q+ +++  SG +L 
Sbjct: 62  VHLFSRIYLILAIAIILVTSLEILNIPIKAFAFVSGAVAIGVGFGAQNIINNFISGWILM 121

Query: 165 TTKPYQIDDWISIDGTEGRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKIINFSRPADMF 224
             +P +I D++ I  T+G V  I+ R+T ++ + G   ++PNS   +  + N++   ++ 
Sbjct: 122 WERPIRIGDFLEIGETKGVVESINTRSTLIRRNDGVHMLVPNSQLLENTVTNWTLIDNIA 181

Query: 225 GLSVSLQVSPHARPQTVIEALERAMQGCRPLLGNPAPSVAFKASASGGVEYEISGFVPAM 284
             +V + V+  +  + V + +++ +     +L  P+P   F+      + ++   +V A 
Sbjct: 182 RSTVRVGVAYGSDVERVADIIKQTLDEHEEILTTPSPVAIFEDFGDNALIFDGIFWVCA- 240

Query: 285 SLKREVRNQLYDLAFR 300
           + + ++R    D+ FR
Sbjct: 241 NTEADIRRIRSDIRFR 256