Pairwise Alignments

Query, 481 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 1060 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 69.3 bits (168), Expect = 6e-16
 Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 12/269 (4%)

Query: 46   YSAVL-FNDGMNPMQVAPYADNTALHLSATA-------LQIGWWLFAARTLTVLLGAVMM 97
            +SA+  F DG+     +   D  A  L  T        + +G+ L  A  L  LL  +++
Sbjct: 765  HSAIFSFLDGITLWTSSSTVDGIAQQLPITLKSLLLGLIIVGFSLMIATNLPGLLELMIL 824

Query: 98   QRVG---HTGRLLQDLVGAVIFLIAIIAAMAYVLDLPVKGVLATSGAVAIIVGLALQSTL 154
            QR+     TG  +  +   ++    +++  +  L +    +     A+++ +G  LQ   
Sbjct: 825  QRLDLTQGTGFAITTVSRYLVVFFGMLSGFS-TLGMEWSKLQWLVAALSVGLGFGLQEIF 883

Query: 155  SDVFSGIVLNTTKPYQIDDWISIDGTEGRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKI 214
            ++  SG+++   KP +I D ++I    G V+ I  RAT +        ++PN      ++
Sbjct: 884  ANFISGLIILFEKPVRIGDTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQL 943

Query: 215  INFSRPADMFGLSVSLQVSPHARPQTVIEALERAMQGCRPLLGNPAPSVAFKASASGGVE 274
            IN+S    +  + V + V+  + P  V  AL +A++ C   L  P P V F        +
Sbjct: 944  INWSLSDPITRVIVYVSVARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQD 1003

Query: 275  YEISGFVPAMSLKREVRNQLYDLAFRHLQ 303
            YEI  +   M+ +  +R++L+    + L+
Sbjct: 1004 YEIRAYAKDMNTRWPLRHKLHKQVSKKLR 1032