Pairwise Alignments

Query, 481 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 11/172 (6%)

Query: 116 FLIAIIAAMAYV----LDLPVKGV------LATSGAVAIIVGLALQSTLSDVFSGIVLNT 165
           F+I + +A+ YV    L + V GV      L  S ++ +I+G  LQ TL+++ SG+ +  
Sbjct: 54  FVIKLFSAILYVFVILLAVGVFGVETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAV 113

Query: 166 TKPYQIDDWISIDGTEGRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKIINFSRPADMFG 225
            KP   D+ + I G  G++ ++   AT+L T    +  IPN L   + I N++R  D+  
Sbjct: 114 MKPLDKDETVQIGGITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYTR-MDLRR 172

Query: 226 LSVSLQVSPHARPQTVIEALERAMQGCRPLLGNPAPSVAFKASASGGVEYEI 277
           + V++ VS        +      +     +L +PAP+V         V+ ++
Sbjct: 173 VDVAVGVSYGENLDNALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQL 224