Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 2e-27
 Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 18/248 (7%)

Query: 37  YSRHAHEHFSIGVVTTG-RSYYHYGAETFEISAGTVVLMNPGDVHACNPIANEPWSYQMV 95
           +SRH+HE +++GV+  G +S+Y  G         +++L+N  +VH  +      W+Y+ +
Sbjct: 36  FSRHSHEGYTVGVIERGAQSFYRTGGNHIA-PQDSIILVNADEVHTGHSAVEGGWAYKAM 94

Query: 96  YIDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGLLELYGILVDEQAEHLQKQ--- 152
           Y        +  ++G +T         PY    V+Y+  L     LV E  E    +   
Sbjct: 95  YPLPEQFATVAKEIGANT-------GAPYFPQAVVYDPELASQLRLVFETLEKSTNRLLR 147

Query: 153 -----SSLVSYFTEVQQRLNPSDTPVREVNHKLERAADYIREHCTDALRLEDICVAAELS 207
                +SLV   T   +    +D P+  +   L    +++ +     + LE++   A LS
Sbjct: 148 ETLIYASLVKLMTRHGRTAPQADQPLSALRPLL-LVKEFLDDFPQADVSLEELAQLAGLS 206

Query: 208 PSYLIRAFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALAAGFADQAHFQRTFKQH 267
           P +L+R F++ +GL PHA+ +  R++ A+  L+QG  I++ A   GF DQ+H  R FK+ 
Sbjct: 207 PFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKA 266

Query: 268 FAATPGQY 275
              TP QY
Sbjct: 267 LGITPKQY 274