Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (273), Expect = 6e-29
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 11/248 (4%)

Query: 30  ADGRKVTYSRHAHEHFSIGVVTTG-RSYYHYGAETFEISAGTVVLMNPGDVHACNPIANE 88
           AD R+  + RH H    IG++T G + +YH GA   ++  G VVLM+P ++H  +  +N 
Sbjct: 22  ADYRQFAFERHYHLDIHIGLITQGVQRFYHQGA-WHQVGQGGVVLMSPDELHDGHAHSNT 80

Query: 89  PWSYQMVYIDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGLLELYGILVDEQAEH 148
            +  Q+  I+  WL   Q  L  +  +    F     +D  L+  L +L+ +L  +    
Sbjct: 81  GYQVQVFSIEPEWL---QQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLLRQDNLSQ 137

Query: 149 LQKQSSLVSYFTEVQQRLN----PSDTPVREVNHKLERAADYIREHCTDALRLEDICVAA 204
           L K       F  + +R +    P+  P+ +  H L    +++       +RLE +    
Sbjct: 138 LAKDCLPYQGFAPLLERYSYLKQPTVKPLGQ--HNLALLKEWVLSQLDQPIRLEQLAQLC 195

Query: 205 ELSPSYLIRAFKQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALAAGFADQAHFQRTF 264
           +LSP+   R FK   GLTP+A+L   R++ A   L+ G+   DVA   GF DQAHF + F
Sbjct: 196 QLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKAF 255

Query: 265 KQHFAATP 272
           K  +  +P
Sbjct: 256 KATYGLSP 263