Pairwise Alignments

Query, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 250 a.a., HTH-type transcriptional activator RhaS from Enterobacter sp. TBS_079

 Score =  112 bits (280), Expect = 9e-30
 Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 37  YSRHAHEHFSIGVVTTGRSYYHYGAETFEISAGTVVLMNPGDVHACNPIANEPWSYQMVY 96
           Y RH H   SIG +  G++        + ++ G ++++     H+CNP+A +P SY M+Y
Sbjct: 29  YKRHCHPQLSIGAILEGQTCCTVHDSEYILTPGDIIVIPAHAPHSCNPVAGKPRSYHMLY 88

Query: 97  IDTPWLTDLQHQLGFSTEQGYRPFNTPYTRDTVLYEGLLELYGILVDEQAEHLQKQSSLV 156
           IDT     LQ                   RD  L+   L++   +           +SL 
Sbjct: 89  IDTDLSLALQ-----------------VIRDQTLFNHYLDVVENMT---------AASLN 122

Query: 157 SYFTEVQQRLNPSDTPVREVNHKL-ERAADYIREHCTDALRLEDICVAAELSPSYLIRAF 215
           +    +      +D P     H L ++  +    + T    L+D+     L    LIR F
Sbjct: 123 ALLCALPPSTGRTDKP-----HSLSQQVQEAFLSNLTAPPSLDDLARRFSLRKETLIRTF 177

Query: 216 KQYYGLTPHAFLVNQRIQFARAQLRQGELIADVALAAGFADQAHFQRTFKQHFAATPGQY 275
           KQ  GLTP  FL   R+++A+A+LR G+ +ADV   +GFADQ+HF +TF  + AATP QY
Sbjct: 178 KQDTGLTPGRFLNISRVEYAKARLRAGDDLADVGYQSGFADQSHFHKTFVSYTAATPRQY 237

Query: 276 RDRLKPSINN 285
                 S NN
Sbjct: 238 ATGRSISDNN 247