Pairwise Alignments

Query, 200 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 216 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  101 bits (251), Expect = 1e-26
 Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 20/205 (9%)

Query: 5   IIIADDHPMFREAMLRTVQRLLPDAV-VQEAGDLDGVLALIHEGGEVDTLILDLRFPGLT 63
           IIIADDHP+FR A+ + +   L + V + EA  +  +   +++G + D ++LDL  PG  
Sbjct: 6   IIIADDHPLFRSALQQALTMGLGENVRLVEAASIAELETFLNQGADWDLVLLDLNMPGAY 65

Query: 64  CMSQLVELRQQLRRTTLIVVSMVDDPALIDQVMALGADGFIGKNIAPDEIGQALLAIREG 123
             S LV LR Q     ++++S  +D A++ +    GA GFI K+ + + I +A+ A+ +G
Sbjct: 66  GFSGLVLLRGQYPHLPVVMISAQEDAAVVARSREFGASGFIPKSSSLETIQEAVRAVLDG 125

Query: 124 EVL--------------VKFAPSGLLPLDTYALTARQQDVLRLIAQGKTNKEIAKALEIS 169
           +V                K A +GL      +LT +Q  VL ++  G  NK+IA  L +S
Sbjct: 126 DVWWPSNIQDVANVSDEAKAASAGLA-----SLTPQQFRVLTMVCDGLLNKQIAYELNVS 180

Query: 170 PFTVRIHVSSLLRTLDVPSRAAAAV 194
             T++ HV+++ R L V +R  AA+
Sbjct: 181 EATIKAHVTAIFRKLGVRTRTQAAL 205