Pairwise Alignments

Query, 200 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 1e-27
 Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 11/204 (5%)

Query: 1   MSSRIIIADDHPMFREAMLRTVQRLLPDAVVQEAGDLDGVLALIHEGGEVDTLILDLRFP 60
           MS R+++ DDHP+ R  + + +       VV EAG     +AL H+  + D ++LDL   
Sbjct: 1   MSCRVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDL-QPDLILLDLNMK 59

Query: 61  GLTCMSQLVELRQQLRRTTLIVVSMVDDPALIDQVMALGADGFIGKNIAPDEIGQALLAI 120
           G++ +  L  LR       ++++++ D  A I+ ++  GADG++ K+  PD++   L   
Sbjct: 60  GMSGLDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQA 119

Query: 121 REGEVLVKFAPSGLL--------PLDTYALTARQQDVLRLIAQGKTNKEIAKALEISPFT 172
            +GE     +    L        P +  ALT R+  ++  +A+G  N++IA  L IS  T
Sbjct: 120 MQGEKAFSESVERYLLNREHTSNPFE--ALTEREMQIMSEVAKGYRNRQIADRLFISEST 177

Query: 173 VRIHVSSLLRTLDVPSRAAAAVKY 196
           V++H+ SLL+ LDVPSR AA + Y
Sbjct: 178 VKVHMKSLLKKLDVPSRTAATILY 201