Pairwise Alignments

Query, 200 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  118 bits (296), Expect = 7e-32
 Identities = 70/196 (35%), Positives = 111/196 (56%), Gaps = 6/196 (3%)

Query: 5   IIIADDHPMFREAMLRTVQRLLPDAVVQEAGDLDGVLALIHEGGEVDTLILDLRFPGLTC 64
           IIIADDHP+FR A+ ++V   +  A + EA  LD +L L+++  E D L+LDL+ PG   
Sbjct: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGANG 66

Query: 65  MSQLVELRQQLRRTTLIVVSMVDDPALIDQVMALGADGFIGKNIAPDEIGQALLAIREGE 124
           MS L+ LR +     ++V+S  ++P+++ QV + GA GFI K+     +  AL  +  GE
Sbjct: 67  MSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGE 126

Query: 125 ------VLVKFAPSGLLPLDTYALTARQQDVLRLIAQGKTNKEIAKALEISPFTVRIHVS 178
                 +LV       L     ALT +Q  VL +++ G  NK+IA  L +S  T++ H++
Sbjct: 127 PYFPAHLLVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATIKAHMT 186

Query: 179 SLLRTLDVPSRAAAAV 194
           ++ R L V +R  A +
Sbjct: 187 AIFRKLGVKNRTQAVI 202