Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 586 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  209 bits (531), Expect = 2e-58
 Identities = 121/291 (41%), Positives = 172/291 (59%), Gaps = 10/291 (3%)

Query: 11  RALDAATNPVLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQSTTFYRNLWM 70
           RA+DAA      T+ SG I ++N  FC + GY + EL+G    LL+SG+    F+ ++W 
Sbjct: 11  RAVDAAAI-FSETDLSGRITYVNDQFCSLFGYRRDELLGVNHRLLNSGQHPDEFFSSMWH 69

Query: 71  TIMAGLSWQGEMVERRKDGGTCTVNQIITPVLDQD-GVVTHFIAILHNFSLIDEERAAMQ 129
           TI  G  W+GE+  R KDG    V+  + PV+D D G V  ++AI  + S   E+R  + 
Sbjct: 70  TIALGQVWKGEICNRAKDGTLYWVDTTLVPVIDDDTGQVERYLAIRFDVS---EKRRLLH 126

Query: 130 QLAF---HDALTGLPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFKSINDTLGHACG 186
            L +   HD LTGLPNR    +LL+QA+  +     PLA+  +DLD FK++ND  GHA G
Sbjct: 127 SLQWRVGHDVLTGLPNRTYLSDLLDQALEFSRAENLPLAVCMLDLDGFKAVNDGYGHASG 186

Query: 187 DRLLVAVAERLGQSVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKLVAAIHQPFMVD 246
           DRLLV VA RL   VR  DVVARL GDEF +++  V  +D+L    ++++ A+  P+ +D
Sbjct: 187 DRLLVEVARRLRSIVRGEDVVARLGGDEFVLVLRHVRGMDELHAALSRVLIAVSMPYGID 246

Query: 247 NHRIETAISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGNGCRFSVLDI 297
              I+   SIG++LF  D    + LL  AD AMY AK++G N  RF + D+
Sbjct: 247 GKGIKVFASIGVTLFPWDNEDAETLLRHADQAMYVAKQSGRN--RFHLFDV 295