Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  213 bits (542), Expect = 1e-59
 Identities = 113/275 (41%), Positives = 167/275 (60%)

Query: 14  DAATNPVLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQSTTFYRNLWMTIM 73
           ++    VLIT    SI  +N+AF  ++GYS+ E +GKTP LL+SG+  + FY  +W  + 
Sbjct: 270 ESTAEGVLITNTDQSISAVNRAFTEITGYSESEAIGKTPRLLASGQHDSAFYAAMWHQLA 329

Query: 74  AGLSWQGEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNFSLIDEERAAMQQLAF 133
           A   WQGE+  RRK+G        I+ V ++D ++THF+A+  + S + + +A +   A 
Sbjct: 330 AEGHWQGEISNRRKNGELYPSWLTISAVRNKDNLLTHFVAVFADISSLKQAQARLDYQAH 389

Query: 134 HDALTGLPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFKSINDTLGHACGDRLLVAV 193
           HD LTGLPNR+LF + L  A+  + +     A++F+DLD FK IND+LGH  GD LL  +
Sbjct: 390 HDPLTGLPNRILFESRLQAALLHSEESGSLGAVLFLDLDRFKHINDSLGHPVGDLLLKGI 449

Query: 194 AERLGQSVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKLVAAIHQPFMVDNHRIETA 253
           A RL +++R  D VARL GDEF +L+ G+ Q    + +ANKL+A    PF    H +  +
Sbjct: 450 AHRLKETLRDIDTVARLGGDEFIVLLPGLLQTSDAQAIANKLLACFSTPFEAGEHELYIS 509

Query: 254 ISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGN 288
            SIG  +F  DG+ V  L+  AD+AMY++K  G N
Sbjct: 510 PSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGRN 544



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 16/90 (17%)

Query: 2   IENDQQVLVRALDAATNPVLIT-ERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQ 60
           ++  ++   +A  A+ + + IT ++ G ++ +N+ FC  +GYS++  +            
Sbjct: 137 LQLSEEKFAKAFHASPDGMAITRQQDGMLLEVNEGFCRQTGYSEKYCL-----------D 185

Query: 61  STTFYRNLWMTIMAGLSWQGEMVERRKDGG 90
            +TF   +W+     LS + +++ER K  G
Sbjct: 186 HSTFDLGIWV----DLSERSKLIERMKKHG 211