Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (428), Expect = 3e-46
 Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 6/289 (2%)

Query: 3   ENDQQVLVRALDAATNPVLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQST 62
           +   ++     + ++  + + +  G+I+ +N AF  ++GYS +E++G         R   
Sbjct: 452 QEQMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHISQFYCPRNKP 511

Query: 63  TFYRNLWMTIMAGLSWQGEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNFSLID 122
            FY  +   I     WQGEM ++ K+G    +   +  + D        +A+   FS I 
Sbjct: 512 AFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAYQRPHRRVAL---FSDIT 568

Query: 123 EERAAMQ---QLAFHDALTGLPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFKSIND 179
           E++A  Q   Q A +D LT LPNR + L+ L++ I+ A +     AL+F+DLD FK +ND
Sbjct: 569 EKKAQEQLIWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVRFALLFLDLDFFKEVND 628

Query: 180 TLGHACGDRLLVAVAERLGQSVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKLVAAI 239
           TLGH  GD+LL+  A+R+   +R SDVVARL GDEF +LI  +  +  +E  A+ ++ AI
Sbjct: 629 TLGHDMGDKLLIECADRIKACIRDSDVVARLGGDEFTVLIRDIHDVGGVERAASNILKAI 688

Query: 240 HQPFMVDNHRIETAISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGN 288
            +PF +       ++SIGI+LF  D S+ + LL  AD AMY AK  G N
Sbjct: 689 AEPFQLGPDSAYISVSIGITLFPEDASTREALLKNADQAMYAAKEQGRN 737