Pairwise Alignments

Query, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  211 bits (538), Expect = 4e-59
 Identities = 120/297 (40%), Positives = 177/297 (59%), Gaps = 8/297 (2%)

Query: 1   MIEN--DQQVLVRALDAATNPVLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSG 58
           ++EN  D ++  +  ++    ++IT+    I+ +N+AF  ++GY  +E+VG+ P + SSG
Sbjct: 393 LLENARDLKLAAQVFESGNEGMVITDGDNRIITVNQAFTRITGYRPEEVVGQNPAIFSSG 452

Query: 59  RQSTTFYRNLWMTIMAGLSWQGEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNF 118
           R    FYR +W  +    +W GE+  RRKDG        I+ V D+ G  +H+IA    F
Sbjct: 453 RHDADFYRQMWHQLRDTGAWSGEIWNRRKDGSLYPEWLNISSVRDEGGQASHYIAA---F 509

Query: 119 SLIDEERAAMQQ---LAFHDALTGLPNRLLFLNLLNQAINGAIKYKQPLALMFIDLDHFK 175
           S I E +AA  Q   LA +DALT LPNR+L  + L QAI  A +    LAL+F+DLD FK
Sbjct: 510 SDITERKAAEAQVRHLAEYDALTNLPNRVLLQDRLGQAIAAARRAGSCLALLFLDLDRFK 569

Query: 176 SINDTLGHACGDRLLVAVAERLGQSVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKL 235
           +IND+LGH  GD++L  V ERL  +VR SD V+RL GDEF +L+  ++   Q   +A KL
Sbjct: 570 NINDSLGHTVGDQVLCQVGERLLTAVRASDTVSRLGGDEFVLLLPQLESPAQAASVAEKL 629

Query: 236 VAAIHQPFMVDNHRIETAISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGNGCRF 292
           +  +  P  +D++ +    SIGI++F  DG   D LL  AD+AMY AK +G N  ++
Sbjct: 630 LLTLATPLAIDDYELAVTPSIGIAVFPEDGEDGDTLLKNADAAMYVAKESGRNNYQY 686